This thread is full of incomplete and inaccurate information. You just cannot paint the entire issue with such a broad brush. Every brake design is different, and what applies to one may not apply to another.
When I worked in a Volvo dealership, I was surprised to learn the Volvo attitude about brakes as it was very different from the domestic makes. Volvo's attitudes seems to be common with other european makes as well.
Volvo did not recommend machining rotors. Indeed, the rotors did seem to be soft and to wear quickly. Volvo also used a very agressive and abrasive pad. Pads wore quickly, and rotors needed to be replaced usually about every 2nd or 3rd pad change. Having observed the results of some independant shops that did turn the rotors it didn't seem to help much because they wore so fast anyway.
Most of the time that I worked as a tech or a service manager in Ford dealerships, rotors were routinely machined mainly because when someone insisted on a shortcut and not machining the rotors, they soon returned with brake shudder complaints. When the rotors are not exceptionally soft and the pads are reasonable, indeed it does help the pads seat in and ensures fewer problems.
I did observe that the rear discs on Expeditions and others were very hard and seldom really required turning. Indeed, they were hard to turn, requiring a sharp cutting tip and slow feeds to keep the tip from chattering and causing a "hearingbone" pattern on the surface.
Since leaving Volvo dealerships, I have observed a steady march of european type brake systems into both domestic and Japanese cars. The ATE (Continental - Teves) is becoming used on more and more applications, and customer dis-satisfaction with brake life is expanding with it. Ford used the ATE system on Contours and presently with Escapes. Chrysler has used it with many models, including many Jeeps. Honda uses it on the front wheels on the Accord. And I'm sure there are many more. I'm aware of these because I have had to deal with irate customers over them.
So as to if it is a good idea to machine rotors, it varies with the brake design. On some cars it is not only acceptable, but it is preferred. On other cars it is not a good idea.