Torque Pro extended PID's will show misfires for current trip and the average for the last 9 trips - or will on my Nissan's. Its like a $10 app, and you need a $20 dongle. Not sure why more people don't use these great diagnostic tools.Yes boots always a concern! And if you kinda know what you're looking for you can sometimes spot carbon tracking on the exterior.
Still, absent ANY ignition related codes or misfire counts greater than zero, I wouldn't necessarily chase coils and boots FIRST, esp since OP did a bunch of work just prior.