The ECM may need to go through a preset number of driving cycles to reset the idle speed. However, I would double check to be sure something was not left disconnected for some reason. Agree also with disconnecting the battery for a few minutes. Just be sure your car stereo does not have a lock mode when power is disconnected!
You may also want to see if the car has (probably does) a trouble code stored, even if the CEL is not lit.
When I have worked on a throttle body before, especially if I have messed with or replaced the Idle Air Control, engine idle is higher when the engine is first started, but this usually is corrected by the ECM within a few minutes.