Somebody posted on another site that they had just such a problem. Unless you use a transmission shop and pay $120, it's hard to find somebody to do both.
I imagine the quicky-lube corporate execs saw too many problems* with doing both, and saw good profit by sticking with the simple fluid exchange they've perfected, and something that the average quicky-lube drone can master. Exchanging the fluid does not get all the contaminants, just the ones suspended in the fluid. On the plus side, I think changing the fluid has first priority over dealing with the contaminant debris, which hopefully stays on the magnet or on the bottom of the pan.
I've never heard of neglected transmissions getting so bad that the filter is clogged. These filters have a relatively high capacity for what they are capturing.
* The problems could be stocking all the necessary filters and gaskets, stripped bolt holes, parts washer to clean the pan, bent pan flanges, leaks after service, and the price shock to present this service to the average customer. At $120 a pop, servicing every 30K could result in the owner spending $500 or more over the life of the car for this maintenance, making the owner wonder if this service will pay off.